A guide to integrations that work with Zendesk and Shopify (2025)

Stevia Putri
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Stevia Putri

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Last edited October 13, 2025

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If you're running a Shopify store, you know that a great product is just the starting line. The real magic, the thing that turns a first-time buyer into a lifelong fan, is amazing customer support. But as your business grows, so does the inbox. Suddenly, your support team is drowning in a sea of repetitive questions: "Where's my order?", "What's your return policy?", "Are you ever going to restock this?"

The secret to scaling your support without burning out your team isn't just hiring more people. It's about making your tools talk to each other. For thousands of online stores, this means finding the right integrations that work with Zendesk and Shopify. This guide will walk you through the options, from the simple, out-of-the-box apps to AI tools that can actually resolve tickets for you.

What are Zendesk and Shopify?

Before we get into connecting them, let's do a quick refresher on the two platforms that are probably running your e-commerce world.

What is Zendesk?

Think of Zendesk as your command center for every single customer conversation. Whether a customer reaches out via email, chat, phone, or social media, it all funnels into one organized place. It’s designed to help your agents track, prioritize, and solve customer issues without losing their minds.

A screenshot of the Zendesk agent workspace, showing how customer conversations are managed in one place. This illustrates one of the integrations that work with Zendesk and Shopify.::
A screenshot of the Zendesk agent workspace, showing how customer conversations are managed in one place. This illustrates one of the integrations that work with Zendesk and Shopify.

What is Shopify?

And Shopify? That’s the engine powering your online store. It’s where you build your website, manage your products and inventory, and handle all the payments. It's the backbone of your retail operation, and connecting it to your support hub is one of the best moves you can make for your team.

Why you need Zendesk and Shopify integrations

Getting Zendesk and Shopify to play nicely together isn't just a "nice-to-have." For a growing business, it's a necessity. When your systems are separate, your support agents are stuck constantly flipping between their Zendesk queue and your Shopify admin panel just to find basic order information. It’s slow, clunky, and frankly, a waste of their time (and your customer's).

Here’s what you gain when you get a solid integration up and running:

  • No more tab-hopping: Agents get a complete picture of the customer, including their order history and shipping status, right inside the Zendesk ticket.

  • Quicker answers for customers: When all the info is in one place, your team can solve problems in a fraction of the time. Happy customers, happy life.

  • More personal support: Seeing a customer's purchase history helps your agents have more relevant and helpful conversations.

  • Less grunt work: You can automate some of the tedious data entry, freeing up your team to handle the trickier issues that actually require a human touch.

Types of Zendesk and Shopify integrations: From native apps to AI

There are a few different ways to connect Zendesk and Shopify, and they range from simple data displays to full-blown automation. Let's break down what's out there.

The official Zendesk for Shopify app: A native integration

Zendesk offers its own free, native integration, which you can find on their marketplace. For a lot of businesses, this is the first port of call.

  • What it does: The app adds a little sidebar in Zendesk that pulls in customer and order data from Shopify. Your agents can see recent orders, check a shipping status, and even process a basic refund or cancellation without leaving the ticket.

  • The catch: While it’s definitely helpful, the app is really just a window into your Shopify data. Your agent still has to read the information, figure out what it means, and type out a reply. It cuts down on switching tabs, but it doesn't actually do the work for them. Some users also find it gets a bit sluggish if they're managing several Shopify stores at once.

Third-party connectors like Zapier

Tools like Zapier let you build little automated workflows between different apps. You create simple "if this happens, then do that" recipes.

  • What they do: For example, you could set up a rule that says, "When a customer pays for a new order in Shopify, automatically create a ticket for them in Zendesk." This can be handy for things like proactive check-ins or internal tracking.

  • The catch: These workflows are pretty rigid. They’re great for one-way actions, but they can't handle the back-and-forth of a real conversation. A "Zap" can create a ticket, but it can't understand the customer's reply and decide what to do next. Plus, managing dozens of these little automations can get complicated and pricey, since you’re often paying for every single task that runs.

AI-powered integrations

The most modern approach is to use a layer of AI that doesn't just pass data back and forth, but actually understands it. This is where a tool like eesel AI comes in.

Instead of just showing an agent the Shopify data, an AI agent can use that data to resolve the ticket all on its own. Take that classic "Where's my order?" question. The AI can:

  1. Read the customer's question and understand what they're asking for.

  2. Securely look up the order details in your Shopify store.

  3. Draft and send a personalized reply with the live shipping status, all within Zendesk.

An eesel AI agent resolving a ticket within the Zendesk interface, showcasing true automation for integrations that work with Zendesk and Shopify.::
An eesel AI agent resolving a ticket within the Zendesk interface, showcasing true automation for integrations that work with Zendesk and Shopify.

This is a leap beyond just syncing data; it's true automation. Unlike some of the clunky middleware out there, eesel AI is built to be self-serve, so you can get it running in minutes. It also comes with predictable pricing, so you don't have to worry about surprise bills based on how many tickets you resolve, which is a common headache with other AI tools.

A quick look at Shopify pricing plans

Your Shopify plan affects everything from transaction fees to how many staff members you can have. Picking the right one is key to keeping your costs in check. Here’s a simple breakdown based on their official pricing page.

FeatureBasicShopifyAdvanced
Monthly Price (billed annually)$29 USD/mo$79 USD/mo$299 USD/mo
Online Credit Card Rates2.9% + 30¢2.7% + 30¢2.5% + 30¢
Third-Party Transaction Fees2.0%1.0%0.6%
Staff Accounts2515
Inventory Locations101010
ReportingBasic reportsStandard reportsAdvanced reports

A quick look at Zendesk pricing plans

Let’s be honest, Zendesk's pricing can be a bit of a maze. Many of their best features, especially their own AI tools, are often locked away in higher-tier plans or sold as expensive add-ons. This can be a real roadblock if you're on a basic plan but want to start automating things. Here’s a peek at their service plans.

FeatureSupport TeamSuite TeamSuite Professional
Monthly Price (billed annually)$19 per agent$55 per agent$115 per agent
ChannelsEmail, Facebook, XAll channels (incl. chat & voice)All channels
AI Agents (Essential)Add-on requiredIncludedIncluded
Help CenterAdd-on required1 help centerUp to 5 help centers
SLAsNoNoYes
ReportingPrebuilt dashboardsPrebuilt dashboardsCustomizable reporting

This is exactly where a third-party AI platform gives you a massive advantage. A tool like eesel AI is designed to work on top of any Zendesk plan, even the most basic one. You get access to powerful, custom AI automation without being strong-armed into a costly upgrade, giving you full control over your tools and your budget.

Beyond data display: Automating work with integrations

Connecting Zendesk and Shopify is a non-negotiable for any e-commerce business that wants to grow. While the native app and simple connectors are a decent start, they only get you halfway there. They show your agents the information, but they don't do anything to reduce the actual workload.

Real efficiency comes from smart automation. By adding an AI layer that can understand what customers want, grab the right data from Shopify, and resolve common questions in Zendesk automatically, you give your support team their time back. They can finally stop answering the same questions over and over and focus on what they do best: building relationships with your customers.

Get started with AI-powered integrations

Ready to stop drowning in repetitive tickets? With eesel AI, you can deploy an AI agent that handles your most common e-commerce questions right out of the box.

Our platform plugs right into the tools you already use, learns from your past tickets and help center articles, and gives you a powerful, self-serve way to automate your support in minutes, not months.

Ready to see how it works? Start your free trial today.

Frequently asked questions

They are crucial because they eliminate the need for support agents to constantly switch between platforms to find customer and order information. This leads to quicker answers, more personalized support, and reduced manual work, greatly improving efficiency.

The guide explores three primary options: the official native Zendesk for Shopify app, third-party connectors like Zapier, and advanced AI-powered tools such as eesel AI. Each offers different levels of automation and functionality.

The official app primarily acts as a window, displaying Shopify data within Zendesk to reduce tab-hopping. More advanced integrations, especially AI tools, go further by actively processing that data to understand requests and resolve tickets automatically, significantly reducing agent workload.

Absolutely. By centralizing customer and order data, and especially through automation provided by AI tools, repetitive tasks like answering "Where's my order?" can be handled automatically. This frees your team to focus on complex issues and building stronger customer relationships.

While basic integrations can work with various plans, leveraging advanced AI often bypasses the need for higher-tier Zendesk plans that lock away their native AI features. Third-party AI tools like eesel AI are designed to work across any Zendesk plan, offering powerful automation without costly upgrades.

The biggest advantage is its ability to not just display data, but to understand customer intent, securely retrieve relevant Shopify information, and automatically resolve common support tickets within Zendesk. This shifts from merely showing data to actively automating resolution.

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Stevia Putri

Stevia Putri is a marketing generalist at eesel AI, where she helps turn powerful AI tools into stories that resonate. She’s driven by curiosity, clarity, and the human side of technology.